Export measurements¶
Export spot counts per lineage¶
Menu Location:
File > Export > Export measurements > Spot counts > Export spot counts per lineage
Export spots counts per lineage per time point.
If spots are selected, only lineages with selected spots are included, otherwise all lineages are included.
Results in one CSV file per lineage.
Example:
Export spot counts per time point¶
Menu Location:
File > Export > Export measurements > Spot counts > Export spot counts per time point
This command writes the time point and the number of spots at each time point to a single CSV file.
Example:
Export division counts per time point¶
Menu Location:
File > Export > Export measurements > Export division counts per time point
This command writes the time point and the number of divisions at each time point to a single CSV file.
A division is defined as a spot with more than one outgoing edge.
Example:
Export phyloXML for selected spot¶
Menu Location:
File > Export > Export phyloXML for selected spot
Export the subtree of the selected spot in phyloXML format.
The phyloXML format is a standard for representing phylogenetic trees: phyloxml.org