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Mastodon Interactive 3D viewer for tracking data (Blender View)
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    Mastodon
    • Mastodon documentation
    Mastodon
    • A. Using Mastodon
    • Getting started with Mastodon. Automated tracking.
    • Manually editing tracks in Mastodon. TrackScheme.
    • Inspecting large datasets.
    • Numerical features and tags. The table and grapher view.
    • Semi-automated tracking.
    • The selection creator.
    • Scripting Mastodon in Fiji.
    • Video Tutorials
    • B. Keyboard shortcuts tables
    • Moving around in the BDV views.
    • Editing spots and links in the BDV views.
    • Moving around in the TrackScheme views.
    • Editing spots and links in the TrackScheme views.
    • Shortcuts for the table views.
    • Navigation through lineages in BDV and TrackScheme views.
    • Setting the selection.
    • C. Mastodon functionalities
    • Existing plugins
    • CSV Importer
    • GraphML Importer
    • Statistics on nearest neighbors
    • Spot trajectory image extractor
    • Track analysis, import and export add-ons (DeepLineage)
    • Track editing, analysis and export add-ons (Tomancak)
    • Interactive 3D viewer for tracking data (Blender View)
      • Show Source
      • Installation
      • About Mastodon Blender View
      • Usage
    • D. Extending Mastodon
    • Mastodon data structures.
    • Creating custom plugins in Mastodon.
    • Custom simple numerical features in Mastodon.
    • Creating custom detectors in Mastodon.
    • E. Technical information
    • Mastodon numerical features.
    • The graph data structure of Mastodon.
    • Containment in Convex Polytopes using k-D trees.
    • Scripting functions
    • Show Source

    Interactive 3D viewer for tracking data (Blender View)¶

    License
    • Installation
      • Setup Blender Addon…
      • Configure Blender Template Files…
    • About Mastodon Blender View
      • New Blender View (Advanced Visuals)
      • New Blender View (Linked to Mastodon)
      • For both options
      • Example of a visualization
    • Usage
      • Blender View (Linked to Mastodon)
      • Blender View (Advanced Visuals)
      • Export CSV for Blender
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